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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_0553Putative response regulator. (573 aa)    
Predicted Functional Partners:
ABLL_1601
EAL/GGDEF domain-containing protein.
 
 0.843
ABLL_2819
Diguanylate cyclase/phosphodiesterase.
 
 0.835
ABLL_0493
Putative diguanylate cyclase/phosphodiesterase.
    0.801
ABLL_2661
Conserved hypothetical protein.
    0.801
ABLL_2006
Diguanylate cyclase/phosphodiesterase.
    0.800
ABLL_0664
Diguanylate cyclase/phosphodiesterase.
    0.797
ABLL_2630
Diguanylate cyclase.
    0.794
ABLL_0552
Conserved hypothetical protein.
  
    0.777
ABLL_0701
Phosphohydrolase.
 
 
 0.731
ABLL_0255
EAL/GGDEF domain-containing protein.
 
    0.716
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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