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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_0638Conserved hypothetical protein. (104 aa)    
Predicted Functional Partners:
ABLL_0637
Sodium-solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.983
ABLL_0639
Acetate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.957
ABLL_0636
Conserved hypothetical protein.
 
  
 0.890
ABLL_0635
DNA polymerase III epsilon subunit.
 
    0.871
ABLL_0642
Cyclic nucleotide-binding domain-containing protein.
 
  
 0.765
ABLL_0643
Sodium-solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.760
ABLL_0641
DNA polymerase III epsilon subunit.
 
    0.714
ackA-3
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
    0.596
ABLL_2356
AMP-dependent synthase and ligase; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.579
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
    0.530
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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