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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_0802Lipopolysaccharide biosynthesis protein. (336 aa)    
Predicted Functional Partners:
ABLL_0806
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.710
ABLL_1966
Conserved hypothetical protein.
  
     0.683
ABLL_0438
Glycosyltransferase.
 
  
 0.670
ABLL_0817
Putative lipopolysaccharide biosynthesis protein.
  
  
 0.658
ABLL_1451
Metallophosphoesterase.
  
     0.635
ABLL_0805
UDP-glucose 6-dehydrogenase.
     
 0.630
ABLL_0804
NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.624
ABLL_0803
Lipopolysaccharide biosynthesis protein.
 
    
0.620
ABLL_0818
Acetyltransferase.
  
  
 0.620
ABLL_0810
UDP-N-acetylglucosamine 2-epimerase.
     
 0.614
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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