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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_0899Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
ABLL_1882
Hypothetical phage protein.
   
 
 0.914
ABLL_1877
Phage baseplate assembly protein.
   
   0.898
ABLL_1888
Phage tail protein.
   
   0.887
ABLL_1876
Phage baseplate assembly protein.
   
   0.626
ABLL_0418
Isochorismatase hydrolase.
   
  
 0.513
ABLL_0900
Conserved hypothetical protein.
       0.509
ABLL_0901
Conserved hypothetical protein.
       0.477
ABLL_0971
Conserved hypothetical protein.
   
    0.447
ABLL_0897
Hypothetical protein.
       0.445
ABLL_0898
Hypothetical protein.
       0.445
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.