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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_0921Phage integrase; Belongs to the 'phage' integrase family. (371 aa)    
Predicted Functional Partners:
ABLL_0920
Hypothetical protein.
       0.773
ABLL_1336
Phage integrase; Belongs to the 'phage' integrase family.
  
     0.676
ABLL_0919
Hypothetical protein.
       0.541
ABLL_0916
Hypothetical protein.
       0.533
ABLL_0917
Hypothetical protein.
       0.533
ABLL_0918
Hypothetical protein.
       0.533
ychF
GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.523
ABLL_0618
Transformation system protein.
   
    0.499
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.495
ABLL_0923
Conserved hypothetical protein.
 
     0.470
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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