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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1007Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (340 aa)    
Predicted Functional Partners:
ABLL_0965
D-alanyl-alanine synthase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
 
 0.968
ABLL_1208
D-alanine--D-alanine ligase.
  
 
 0.922
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
 
     0.805
ABLL_1006
Hypothetical protein.
       0.774
nadD
Nicotinate-nicotinamide nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
  
 0.703
ABLL_0967
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase.
 
   
 0.699
ABLL_2417
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
   
 0.692
ABLL_2478
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthase; Belongs to the MurCDEF family.
 
 
 
 0.679
ABLL_0368
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.633
ABLL_0972
D-amino acid dehydrogenase.
  
  
 0.626
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.