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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1030Ureidoglycolate hydrolase. (172 aa)    
Predicted Functional Partners:
ABLL_1045
Allantoicase.
 
 
  0.979
ureB
Urease beta and gamma subunits; Belongs to the urease beta subunit family.
    
  0.919
ABLL_1046
Ureidoglycolate hydrolase.
 
  
 
0.918
ureB-2
Urease alpha subunit.
    
  0.913
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
 
  
 0.872
ABLL_0425
D-isomer specific 2-hydroxyacid dehydrogenase.
     
  0.800
ABLL_1594
Anaerobic glycerol-3-phosphate dehydrogenase subunit C.
     
  0.800
ABLL_2347
Glycolate oxidase.
     
  0.800
ABLL_1044
Putative polysaccharide deacetylase.
 
     0.714
ABLL_1042
Putative hydantoin racemase.
 
     0.641
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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