Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1409Conserved hypothetical protein. (216 aa)    
Predicted Functional Partners:
ABLL_1408
Glutathionylspermidine synthase.
 
 
   0.957
ABLL_2759
Conserved hypothetical protein.
  
     0.713
ABLL_2098
Conserved hypothetical protein.
  
     0.704
ABLL_2404
Conserved hypothetical protein.
  
     0.695
ABLL_1714
Conserved hypothetical protein.
  
     0.674
ABLL_2089
Conserved hypothetical protein.
 
     0.672
ABLL_2486
Molybdopterin converting factor subunit 2.
  
     0.662
ABLL_0501
Conserved hypothetical protein.
  
     0.637
ABLL_2325
Conserved hypothetical protein.
  
     0.637
ABLL_1339
Flagellar motor protein MotB.
    
   0.627
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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