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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1589Conserved hypothetical protein. (696 aa)    
Predicted Functional Partners:
ABLL_1590
Conserved hypothetical protein.
       0.709
ABLL_1591
Conserved hypothetical protein.
       0.709
ABLL_1592
Conserved hypothetical protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
       0.709
ABLL_1406
Conserved hypothetical protein.
  
  
 0.631
ABLL_2349
Protein kinase.
  
  
 0.521
ABLL_1752
Conserved hypothetical protein.
 
     0.514
ABLL_1593
Conserved hypothetical protein.
       0.491
ABLL_1989
Two-component sensor kinase.
   
 
 0.486
ABLL_1765
Two-component sensor kinase.
   
 
 0.484
ABLL_2314
Diguanylate cyclase.
   
 
 0.484
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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