Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1674Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
ABLL_1675
TetR family transcriptional regulator.
       0.773
ABLL_2218
Conserved hypothetical protein.
  
     0.680
ABLL_2219
Putative cytochrome.
  
     0.600
ABLL_2822
Putative succinylglutamate desuccinylase/aspartoacylase.
  
     0.557
ABLL_1676
Conserved hypothetical protein.
       0.548
ABLL_0042
Conserved hypothetical protein.
  
     0.523
ABLL_2046
Conserved hypothetical protein.
  
     0.466
ABLL_0582
Putative periplasmic protein; Belongs to the UPF0312 family.
  
     0.423
ABLL_2132
Conserved hypothetical protein.
  
     0.420
ABLL_2828
Phosphoesterase.
  
     0.420
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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