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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1704Conserved hypothetical protein. (999 aa)    
Predicted Functional Partners:
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.
       0.540
ABLL_1705
Conserved hypothetical protein.
       0.488
ABLL_2568
Putative fusaric acid resistance protein.
  
  
 0.462
ABLL_1722
Conserved hypothetical protein.
  
  
 0.461
ABLL_1706
Conserved hypothetical protein.
       0.453
ABLL_2358
Putative citrate lyase; Belongs to the HpcH/HpaI aldolase family.
  
     0.412
ABLL_2428
Conserved hypothetical protein.
 
     0.405
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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