Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1970Conserved hypothetical protein. (541 aa)    
Predicted Functional Partners:
ABLL_2020
ABC transporter ATP-binding component.
  
  
 0.703
ABLL_1971
Conserved hypothetical protein.
       0.634
ABLL_0970
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
 
  
 0.608
ABLL_0046
Conserved hypothetical protein.
  
  
 0.571
ABLL_2038
Conserved hypothetical protein.
  
  
 0.571
ABLL_0134
Oxidoreductase.
  
  
 0.554
ABLL_1653
NAD(P)H-flavin nitroreductase.
  
  
 0.551
ABLL_1344
ABC transporter permease component.
  
  
 0.532
ABLL_1345
ABC transporter permease component.
  
  
 0.532
ABLL_2019
ABC transporter permease component.
  
  
 0.532
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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