Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1981Flavocytochrome c sulphide dehydrogenase. (425 aa)    
Predicted Functional Partners:
ABLL_1980
Cytochrome c.
 
 
 0.998
ABLL_1402
Nitrite reductase small subunit.
  
 0.942
ABLL_0264
Putative sulfide:quinone reductase.
 
 
0.937
ABLL_2501
Ferredoxin-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.916
ABLL_2808
Sulfite reductase iron-sulfur subunit.
  
 0.916
ABLL_2803
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.915
ABLL_2207
Cystathionine gamma-synthase.
  
 
 0.907
ABLL_0972
D-amino acid dehydrogenase.
  
 0.901
ABLL_1354
D-amino acid oxidase domain-containing protein.
  
 0.901
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
  0.891
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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