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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_1996Diguanylate cyclase/phosphodiesterase. (558 aa)    
Predicted Functional Partners:
ABLL_1989
Two-component sensor kinase.
 
 
 0.969
ABLL_1021
Two-component sensor kinase.
 
 
 0.949
ABLL_1765
Two-component sensor kinase.
 
 
 0.949
ABLL_2314
Diguanylate cyclase.
 
 
 0.949
ABLL_0561
Two-component sensor kinase.
 
 
0.932
ABLL_0419
Conserved hypothetical protein.
 
 0.929
ABLL_1756
Two-component sensor kinase.
 
 
0.927
ABLL_2128
Truncated two-component response regulator.
 
 
 0.926
ABLL_1247
Two-component sensor kinase.
 
 
0.923
ABLL_1629
GGDEF domain-containing protein.
 
 
 0.906
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.