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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_2009Allophanate hydrolase subunit I. (224 aa)    
Predicted Functional Partners:
ABLL_2008
Allophanate hydrolase subunit II.
 0.999
ABLL_2010
Conserved hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.998
ABLL_0698
Transcriptional regulator.
  
    0.829
ABLL_2012
TRAP dicarboxylate transporter small subunit.
       0.798
ABLL_2013
TRAP dicarboxylate transporter periplasmic subunit.
       0.776
ABLL_2011
TRAP dicarboxylate transporter large subunit.
       0.772
ABLL_1820
Urea carboxylase.
  
 
  0.639
ABLL_2014
Two-component response regulator.
       0.557
ABLL_2015
Two-component sensor kinase.
       0.557
ABLL_1821
Conserved hypothetical protein.
    
 0.552
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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