rpmA protein (Arcobacter sp. L) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rpmA

50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (85 aa)

Predicted Functional Partners:

rplU

0.997

rplO

0.994

rplQ

0.994

rplM

0.993

rpsO

0.993

rpsP

0.993

ABLL_0974

0.992

rplS

0.992

rpoB

0.991

rplL

0.991

Your Current Organism:

Arcobacter sp. L

NCBI taxonomy Id: 944547
Other names: A. sp. L

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABLL_0974	rplL	ABLL_0974	ABLL_2470	50S ribosomal protein L3.	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.992
ABLL_0974	rplM	ABLL_0974	ABLL_0247	50S ribosomal protein L3.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
ABLL_0974	rplO	ABLL_0974	ABLL_0992	50S ribosomal protein L3.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
ABLL_0974	rplQ	ABLL_0974	ABLL_1770	50S ribosomal protein L3.	50S ribosomal protein L17.	0.992
ABLL_0974	rplS	ABLL_0974	ABLL_2516	50S ribosomal protein L3.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.989
ABLL_0974	rplU	ABLL_0974	ABLL_2086	50S ribosomal protein L3.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
ABLL_0974	rpmA	ABLL_0974	ABLL_2085	50S ribosomal protein L3.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.992
ABLL_0974	rpoB	ABLL_0974	ABLL_2469	50S ribosomal protein L3.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ABLL_0974	rpsO	ABLL_0974	ABLL_0499	50S ribosomal protein L3.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.992
ABLL_0974	rpsP	ABLL_0974	ABLL_2405	50S ribosomal protein L3.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
rplL	ABLL_0974	ABLL_2470	ABLL_0974	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L3.	0.992
rplL	rplM	ABLL_2470	ABLL_0247	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.993
rplL	rplO	ABLL_2470	ABLL_0992	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.990
rplL	rplQ	ABLL_2470	ABLL_1770	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L17.	0.990
rplL	rplS	ABLL_2470	ABLL_2516	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.989
rplL	rplU	ABLL_2470	ABLL_2086	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
rplL	rpmA	ABLL_2470	ABLL_2085	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.991
rplL	rpoB	ABLL_2470	ABLL_2469	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplL	rpsO	ABLL_2470	ABLL_0499	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rplL	rpsP	ABLL_2470	ABLL_2405	50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989