Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_2159Conserved hypothetical protein. (372 aa)    
Predicted Functional Partners:
ABLL_2160
Conserved hypothetical protein.
 
  
 
0.978
ABLL_0035
Conserved hypothetical protein.
  
  
 
0.908
ABLL_2283
Conserved hypothetical protein.
   
    0.737
ABLL_2161
Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
       0.732
ABLL_2162
Conserved hypothetical protein.
       0.732
ABLL_2163
Saccharopine dehydrogenase.
       0.661
ABLL_1574
Coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.493
ABLL_1827
Conserved hypothetical protein.
   
    0.471
ABLL_2576
Cytochrome c oxidase cbb3-type subunit II.
   
    0.457
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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