Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ABLL_2210Diguanylate cyclase/phosphodiesterase. (678 aa)    
Predicted Functional Partners:
ABLL_2211
Two-component sensor kinase.
  
  
0.718
ABLL_0709
Conserved hypothetical protein.
 
 
 0.693
ABLL_2209
Methyl-accepting chemotaxis protein.
   
   0.656
ABLL_1210
Diguanylate cyclase/phosphodiesterase.
 
 
0.651
ABLL_1601
EAL/GGDEF domain-containing protein.
 
 
0.633
ABLL_1989
Two-component sensor kinase.
 
 
 0.632
ABLL_1996
Diguanylate cyclase/phosphodiesterase.
 
 
0.622
ABLL_2819
Diguanylate cyclase/phosphodiesterase.
 
 
0.620
ABLL_2785
Two-component response regulator.
 
 
 0.594
ABLL_1640
Two-component response regulator.
 
 
 0.574
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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