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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_2298Guanosine pentaphosphate phosphohydrolase. (489 aa)    
Predicted Functional Partners:
ABLL_0787
ppGpp synthase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
 
 
 0.931
ABLL_1495
Phosphatase.
  
  
 
0.928
ABLL_1088
Guanosine polyphosphate pyrophosphohydrolase/synthetase.
  
 
 0.914
ABLL_2297
Lipid A biosynthesis lauroyl acyltransferase.
       0.803
ABLL_2299
Ferredoxin.
       0.803
ABLL_2296
Conserved hypothetical protein.
       0.773
ABLL_2295
UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
    0.746
ABLL_2289
Glycosyltransferase.
       0.741
ABLL_2290
Conserved hypothetical protein.
       0.741
ABLL_2291
Conserved hypothetical protein.
       0.741
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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