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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_2438Auxin efflux carrier. (290 aa)    
Predicted Functional Partners:
ABLL_2439
2-hydroxymuconic semialdehyde hydrolase.
   
   0.644
ABLL_0131
Putative transport protein.
  
     0.598
ABLL_2440
4-oxalocrotonate tautomerase.
 
     0.561
ABLL_1430
NAD-dependent malic enzyme.
  
  
 0.543
ABLL_2448
Putative ferredoxin.
 
    0.530
ABLL_2597
Conserved hypothetical protein.
  
     0.473
ABLL_2441
4-oxalocrotonate decarboxylase.
       0.471
ABLL_2442
4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
       0.471
ABLL_2443
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
       0.471
ABLL_2444
2-oxopent-4-enoate hydratase.
       0.468
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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