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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABLL_2686dTDP-6-deoxy-L-hexose 3-O-methyltransferase. (220 aa)    
Predicted Functional Partners:
ABLL_2685
Methyltransferase.
 
  
 0.861
ABLL_2415
Peptidase.
  
  
 0.859
ABLL_2687
N-acetylneuraminic acid phosphate synthase.
 
     0.825
ABLL_2688
Mannose-1-phosphate guanylyltransferase.
       0.810
ABLL_2684
Acylneuraminate cytidylyltransferase.
       0.808
ABLL_2683
Conserved hypothetical protein.
       0.608
ABLL_2689
Conserved hypothetical protein.
       0.533
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.462
ABLL_2530
16S ribosomal RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
   
    0.430
ABLL_1777
Exopolyphosphatase-like protein.
  
     0.406
Your Current Organism:
Arcobacter sp. L
NCBI taxonomy Id: 944547
Other names: A. sp. L
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