Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS35564.1 | EGS36119.1 | HMPREF9102_0262 | HMPREF9102_1077 | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | Hypothetical protein. | 0.751 |
| EGS35564.1 | EGS38936.1 | HMPREF9102_0262 | HMPREF9102_0004 | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | 0.461 |
| EGS36119.1 | EGS35564.1 | HMPREF9102_1077 | HMPREF9102_0262 | Hypothetical protein. | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.751 |
| EGS36119.1 | EGS38934.1 | HMPREF9102_1077 | HMPREF9102_0005 | Hypothetical protein. | Identified by match to protein family HMM PF06265. | 0.777 |
| EGS36119.1 | EGS38936.1 | HMPREF9102_1077 | HMPREF9102_0004 | Hypothetical protein. | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | 0.773 |
| EGS36119.1 | EGS38942.1 | HMPREF9102_1077 | HMPREF9102_0006 | Hypothetical protein. | Hypothetical protein. | 0.454 |
| EGS36534.1 | EGS38934.1 | HMPREF9102_0825 | HMPREF9102_0005 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481; match to protein family HMM PF07228. | Identified by match to protein family HMM PF06265. | 0.416 |
| EGS36534.1 | EGS38936.1 | HMPREF9102_0825 | HMPREF9102_0004 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481; match to protein family HMM PF07228. | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | 0.423 |
| EGS36534.1 | EGS39566.1 | HMPREF9102_0825 | HMPREF9102_0770 | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481; match to protein family HMM PF07228. | Putative ribosomal RNA small subunit methyltransferase F; Identified by match to protein family HMM PF01189. | 0.448 |
| EGS38933.1 | EGS38934.1 | HMPREF9102_0008 | HMPREF9102_0005 | N-6 DNA Methylase; Identified by match to protein family HMM PF02384. | Identified by match to protein family HMM PF06265. | 0.652 |
| EGS38933.1 | EGS38936.1 | HMPREF9102_0008 | HMPREF9102_0004 | N-6 DNA Methylase; Identified by match to protein family HMM PF02384. | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | 0.461 |
| EGS38933.1 | EGS38942.1 | HMPREF9102_0008 | HMPREF9102_0006 | N-6 DNA Methylase; Identified by match to protein family HMM PF02384. | Hypothetical protein. | 0.582 |
| EGS38934.1 | EGS36119.1 | HMPREF9102_0005 | HMPREF9102_1077 | Identified by match to protein family HMM PF06265. | Hypothetical protein. | 0.777 |
| EGS38934.1 | EGS36534.1 | HMPREF9102_0005 | HMPREF9102_0825 | Identified by match to protein family HMM PF06265. | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481; match to protein family HMM PF07228. | 0.416 |
| EGS38934.1 | EGS38933.1 | HMPREF9102_0005 | HMPREF9102_0008 | Identified by match to protein family HMM PF06265. | N-6 DNA Methylase; Identified by match to protein family HMM PF02384. | 0.652 |
| EGS38934.1 | EGS38936.1 | HMPREF9102_0005 | HMPREF9102_0004 | Identified by match to protein family HMM PF06265. | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | 0.946 |
| EGS38934.1 | EGS38942.1 | HMPREF9102_0005 | HMPREF9102_0006 | Identified by match to protein family HMM PF06265. | Hypothetical protein. | 0.902 |
| EGS38936.1 | EGS35564.1 | HMPREF9102_0004 | HMPREF9102_0262 | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. | 0.461 |
| EGS38936.1 | EGS36119.1 | HMPREF9102_0004 | HMPREF9102_1077 | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | Hypothetical protein. | 0.773 |
| EGS38936.1 | EGS36534.1 | HMPREF9102_0004 | HMPREF9102_0825 | HAD hydrolase, TIGR01457 family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00702. | Putative serine/threonine phosphatase stp; Identified by match to protein family HMM PF00481; match to protein family HMM PF07228. | 0.423 |
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