Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS36983.1 | EGS37020.1 | HMPREF9102_1835 | HMPREF9102_1796 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.443 |
| EGS36983.1 | EGS37053.1 | HMPREF9102_1835 | HMPREF9102_1770 | Hypothetical protein. | Hypothetical protein. | 0.537 |
| EGS36983.1 | EGS37861.1 | HMPREF9102_1835 | HMPREF9102_0077 | Hypothetical protein. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.611 |
| EGS36983.1 | EGS37880.1 | HMPREF9102_1835 | HMPREF9102_0072 | Hypothetical protein. | Hypothetical protein. | 0.691 |
| EGS36983.1 | EGS39587.1 | HMPREF9102_1835 | HMPREF9102_1324 | Hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.522 |
| EGS37020.1 | EGS36983.1 | HMPREF9102_1796 | HMPREF9102_1835 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.443 |
| EGS37020.1 | EGS37053.1 | HMPREF9102_1796 | HMPREF9102_1770 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.432 |
| EGS37020.1 | EGS37861.1 | HMPREF9102_1796 | HMPREF9102_0077 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.470 |
| EGS37020.1 | EGS37880.1 | HMPREF9102_1796 | HMPREF9102_0072 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.720 |
| EGS37053.1 | EGS36983.1 | HMPREF9102_1770 | HMPREF9102_1835 | Hypothetical protein. | Hypothetical protein. | 0.537 |
| EGS37053.1 | EGS37020.1 | HMPREF9102_1770 | HMPREF9102_1796 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.432 |
| EGS37053.1 | EGS37861.1 | HMPREF9102_1770 | HMPREF9102_0077 | Hypothetical protein. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.509 |
| EGS37053.1 | EGS37880.1 | HMPREF9102_1770 | HMPREF9102_0072 | Hypothetical protein. | Hypothetical protein. | 0.693 |
| EGS37861.1 | EGS36983.1 | HMPREF9102_0077 | HMPREF9102_1835 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.611 |
| EGS37861.1 | EGS37020.1 | HMPREF9102_0077 | HMPREF9102_1796 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.470 |
| EGS37861.1 | EGS37053.1 | HMPREF9102_0077 | HMPREF9102_1770 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.509 |
| EGS37861.1 | EGS37877.1 | HMPREF9102_0077 | HMPREF9102_0075 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.472 |
| EGS37861.1 | EGS37878.1 | HMPREF9102_0077 | HMPREF9102_0078 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Dipeptidase PepV; Identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887. | 0.740 |
| EGS37861.1 | EGS37880.1 | HMPREF9102_0077 | HMPREF9102_0072 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein. | 0.485 |
| EGS37861.1 | EGS37882.1 | HMPREF9102_0077 | HMPREF9102_0076 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Universal stress family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.981 |
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