STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide-methionine (S)-S-oxide reductase; Identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401. (174 aa)    
Predicted Functional Partners:
msrB
methionine-R-sulfoxide reductase; Identified by match to protein family HMM PF01641; match to protein family HMM TIGR00357.
 
 0.971
polA
DNA-directed DNA polymerase; Identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593.
  
  
 0.838
EGS37869.1
NLPA lipoprotein; Identified by match to protein family HMM PF03180.
       0.729
EGS37828.1
Thioredoxin; Identified by match to protein family HMM PF00085.
   
 0.650
EGS37399.1
Gram-positive signal peptide protein, YSIRK family; Identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331.
     
 0.582
nrdH
Glutaredoxin-like protein NrdH.
  
 
 0.547
gmk
Guanylate kinase; Identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263.
   
 
 0.520
EGS37995.1
Putative thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992.
     
 0.511
EGS35970.1
Putative membrane protein.
  
 
 0.483
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.