STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36390.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
adh
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465.
  
 
 0.575
EGS37360.1
Hypothetical protein.
 
 
 0.543
EGS36393.1
Aspartate racemase; Identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035.
       0.507
EGS36494.1
UbiC transcription regulator-associated domain protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702.
     
 0.475
EGS36408.1
Putative aspartate-alanine antiporter; Identified by match to protein family HMM PF06826; match to protein family HMM TIGR01625.
       0.460
EGS36061.1
Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
 
     0.455
EGS37469.1
PTS system Galactitol-specific IIC component.
 
  
 0.406
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.