STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36464.1Identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837. (649 aa)    
Predicted Functional Partners:
EGS36495.1
Beta galactosidase small chain; Identified by match to protein family HMM PF02929.
 
 0.999
EGS37469.1
PTS system Galactitol-specific IIC component.
  
  
 0.999
EGS37021.1
Putative PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM TIGR00792; match to protein family HMM TIGR00830.
 
  
 0.861
EGS37025.1
Transcriptional regulator, LacI family; Identified by match to protein family HMM PF00356.
     
 0.815
galK
Galactokinase; Identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00131.
 
  
 0.782
EGS37465.1
Alpha-galactosidase; Identified by match to protein family HMM PF02065.
 
  
 0.775
EGS36024.1
Beta-galactosidase trimerization domain protein; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.
   
 0.732
galT
UTP--hexose-1-phosphate uridylyltransferase; Identified by match to protein family HMM PF01087; match to protein family HMM PF02744; match to protein family HMM TIGR01239.
 
  
 0.630
gph
Glycoside/pentoside/hexuronide transporter; Identified by match to protein family HMM TIGR00792.
 
  
 0.593
ccpA
Identified by match to protein family HMM PF00356; match to protein family HMM PF00532; match to protein family HMM TIGR01481.
     
 0.578
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.