STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36456.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
EGS36460.1
DEAD/DEAH box helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271.
       0.763
EGS36417.1
Oxidoreductase, NAD-binding domain protein; Identified by match to protein family HMM PF01408.
       0.748
EGS37003.1
Hypothetical protein.
  
     0.669
EGS35953.1
Hypothetical protein.
  
    0.660
EGS37880.1
Hypothetical protein.
  
     0.608
EGS36617.1
Bacterial membrane protein YfhO; Identified by match to protein family HMM PF09586.
  
     0.606
EGS38038.1
Hypothetical protein.
  
     0.600
EGS37034.1
Identified by match to protein family HMM PF01261.
  
     0.564
EGS37852.1
Hypothetical protein.
  
    0.558
EGS36621.1
Hypothetical protein.
  
     0.554
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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