STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36463.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
EGS36423.1
Putative membrane protein.
 
     0.878
EGS36493.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
    0.869
EGS36431.1
Putative capsular biosynthesis protein.
 
    0.817
EGS36434.1
Putative capsular biosynthesis protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
    0.815
yfdH
Bactoprenol glucosyl transferase-like protein; Identified by match to protein family HMM PF00535.
  
    0.787
EGS36387.1
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
  
 0.752
EGS36454.1
Bacterial sugar transferase; Identified by match to protein family HMM PF02397.
  
  
 0.743
EGS36418.1
Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943; match to protein family HMM PF03023.
 
  
 0.698
EGS36406.1
Hypothetical protein.
  
  
 0.681
asp2
Accessory Sec system protein Asp2; Identified by match to protein family HMM TIGR03712.
 
 
 
 0.675
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.