Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS37913.1 | EGS37938.1 | HMPREF9102_0425 | HMPREF9102_0420 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein. | 0.567 |
| EGS37913.1 | EGS38024.1 | HMPREF9102_0425 | HMPREF9102_0421 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Tape measure domain protein; Identified by match to protein family HMM TIGR02675. | 0.686 |
| EGS37913.1 | EGS38049.1 | HMPREF9102_0425 | HMPREF9102_0422 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF06997. | 0.701 |
| EGS37913.1 | EGS38088.1 | HMPREF9102_0425 | HMPREF9102_0427 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.712 |
| EGS37913.1 | EGS38113.1 | HMPREF9102_0425 | HMPREF9102_0426 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Conserved domain protein. | 0.727 |
| EGS37913.1 | EGS38151.1 | HMPREF9102_0425 | HMPREF9102_0419 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Conserved domain protein. | 0.567 |
| EGS37913.1 | EGS38156.1 | HMPREF9102_0425 | HMPREF9102_0423 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Identified by match to protein family HMM PF00877. | 0.701 |
| EGS37913.1 | EGS38178.1 | HMPREF9102_0425 | HMPREF9102_0424 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183. | 0.701 |
| EGS37938.1 | EGS37913.1 | HMPREF9102_0420 | HMPREF9102_0425 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.567 |
| EGS37938.1 | EGS38024.1 | HMPREF9102_0420 | HMPREF9102_0421 | Hypothetical protein. | Tape measure domain protein; Identified by match to protein family HMM TIGR02675. | 0.639 |
| EGS37938.1 | EGS38049.1 | HMPREF9102_0420 | HMPREF9102_0422 | Hypothetical protein. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF06997. | 0.622 |
| EGS37938.1 | EGS38067.1 | HMPREF9102_0420 | HMPREF9102_0418 | Hypothetical protein. | Hypothetical protein. | 0.488 |
| EGS37938.1 | EGS38088.1 | HMPREF9102_0420 | HMPREF9102_0427 | Hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.525 |
| EGS37938.1 | EGS38113.1 | HMPREF9102_0420 | HMPREF9102_0426 | Hypothetical protein. | Conserved domain protein. | 0.536 |
| EGS37938.1 | EGS38151.1 | HMPREF9102_0420 | HMPREF9102_0419 | Hypothetical protein. | Conserved domain protein. | 0.773 |
| EGS37938.1 | EGS38156.1 | HMPREF9102_0420 | HMPREF9102_0423 | Hypothetical protein. | Identified by match to protein family HMM PF00877. | 0.622 |
| EGS37938.1 | EGS38178.1 | HMPREF9102_0420 | HMPREF9102_0424 | Hypothetical protein. | Glycosyl hydrolase family 25; Identified by match to protein family HMM PF01183. | 0.622 |
| EGS38024.1 | EGS37913.1 | HMPREF9102_0421 | HMPREF9102_0425 | Tape measure domain protein; Identified by match to protein family HMM TIGR02675. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by glimmer; putative. | 0.686 |
| EGS38024.1 | EGS37938.1 | HMPREF9102_0421 | HMPREF9102_0420 | Tape measure domain protein; Identified by match to protein family HMM TIGR02675. | Hypothetical protein. | 0.639 |
| EGS38024.1 | EGS38049.1 | HMPREF9102_0421 | HMPREF9102_0422 | Tape measure domain protein; Identified by match to protein family HMM TIGR02675. | Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF06997. | 0.984 |
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