STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS39579.1Hypothetical protein; Identified by glimmer; putative. (38 aa)    
Predicted Functional Partners:
EGS39503.1
Drug resistance MFS transporter, drug:H+ antiporter-2 family; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711.
       0.598
EGS39491.1
ABC-2 type transporter; Identified by match to protein family HMM PF01061.
       0.554
EGS39384.1
Putative daunorubicin/doxorubicin resistance ATP-binding protein DrrA; Identified by match to protein family HMM PF00005.
       0.554
EGS39578.1
LytTr DNA-binding domain protein; Identified by match to protein family HMM PF04397.
       0.509
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.