STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS39544.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
recJ
single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644.
       0.800
rnz
Ribonuclease Z; Identified by match to protein family HMM PF00753; match to protein family HMM TIGR02651.
       0.781
apt
Adenine phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01090.
       0.762
EGS35811.1
Acyltransferase; Identified by match to protein family HMM PF01757.
  
    0.670
EGS37822.1
Hydrolase, HD family; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR00488.
  
    0.667
EGS39011.1
Identified by match to protein family HMM PF06103.
  
    0.574
rnhA-2
Ribonuclease HI; Identified by match to protein family HMM PF00075.
       0.532
EGS37320.1
Identified by match to protein family HMM PF07929.
 
     0.461
cgtA
Obg family GTPase CgtA; Identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM PF09269; match to protein family HMM TIGR00231; match to protein family HMM TIGR02729; match to protein family HMM TIGR03595.
       0.457
EGS39455.1
Transposase; Identified by match to protein family HMM PF01610.
       0.454
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.