Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS36558.1 | EGS36561.1 | HMPREF9102_0798 | HMPREF9102_0797 | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.482 |
| EGS36558.1 | EGS36568.1 | HMPREF9102_0798 | HMPREF9102_0795 | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | 0.890 |
| EGS36558.1 | EGS36569.1 | HMPREF9102_0798 | HMPREF9102_0800 | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.738 |
| EGS36558.1 | EGS36573.1 | HMPREF9102_0798 | HMPREF9102_0799 | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.789 |
| EGS36558.1 | EGS36589.1 | HMPREF9102_0798 | HMPREF9102_0796 | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | Hypothetical protein; Identified by glimmer; putative. | 0.482 |
| EGS36561.1 | EGS36558.1 | HMPREF9102_0797 | HMPREF9102_0798 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | 0.482 |
| EGS36561.1 | EGS36568.1 | HMPREF9102_0797 | HMPREF9102_0795 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | 0.768 |
| EGS36561.1 | EGS36569.1 | HMPREF9102_0797 | HMPREF9102_0800 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.438 |
| EGS36561.1 | EGS36573.1 | HMPREF9102_0797 | HMPREF9102_0799 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.459 |
| EGS36561.1 | EGS36589.1 | HMPREF9102_0797 | HMPREF9102_0796 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| EGS36568.1 | EGS36558.1 | HMPREF9102_0795 | HMPREF9102_0798 | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | 0.890 |
| EGS36568.1 | EGS36561.1 | HMPREF9102_0795 | HMPREF9102_0797 | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.768 |
| EGS36568.1 | EGS36569.1 | HMPREF9102_0795 | HMPREF9102_0800 | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.679 |
| EGS36568.1 | EGS36573.1 | HMPREF9102_0795 | HMPREF9102_0799 | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.769 |
| EGS36568.1 | EGS36589.1 | HMPREF9102_0795 | HMPREF9102_0796 | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | Hypothetical protein; Identified by glimmer; putative. | 0.768 |
| EGS36569.1 | EGS36558.1 | HMPREF9102_0800 | HMPREF9102_0798 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. | 0.738 |
| EGS36569.1 | EGS36561.1 | HMPREF9102_0800 | HMPREF9102_0797 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.438 |
| EGS36569.1 | EGS36568.1 | HMPREF9102_0800 | HMPREF9102_0795 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728. | 0.679 |
| EGS36569.1 | EGS36573.1 | HMPREF9102_0800 | HMPREF9102_0799 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | 0.761 |
| EGS36569.1 | EGS36589.1 | HMPREF9102_0800 | HMPREF9102_0796 | Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. | Hypothetical protein; Identified by glimmer; putative. | 0.438 |
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