STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36558.1Putative bacteriochlorophyll 4-vinyl reductase; Identified by match to protein family HMM PF01501. (396 aa)    
Predicted Functional Partners:
EGS36568.1
Glycosyltransferase, SP_1767 family; Identified by match to protein family HMM PF08759; match to protein family HMM TIGR03728.
    0.890
EGS36573.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
    0.789
gtfA
Accessory Sec system glycosylation protein GtfA; Identified by match to protein family HMM PF00534; match to protein family HMM PF09318; match to protein family HMM TIGR02918.
 
    0.744
EGS36569.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
    0.738
asp1
Accessory Sec system protein Asp1; Identified by match to protein family HMM TIGR03713.
 
    0.736
asp3
Accessory Sec system protein Asp3; Identified by match to protein family HMM TIGR03711.
 
     0.726
EGS36557.1
Hypothetical protein.
 
    0.714
asp2
Accessory Sec system protein Asp2; Identified by match to protein family HMM TIGR03712.
 
     0.690
EGS39475.1
Glycosyltransferase family 8; Identified by match to protein family HMM PF01501.
  
     0.680
secY2
Accessory Sec system translocase SecY2; Identified by match to protein family HMM PF00344; match to protein family HMM TIGR02920.
 
     0.506
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.