STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36548.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EGS36621.1
Hypothetical protein.
 
     0.980
EGS36612.1
Hypothetical protein.
 
     0.977
EGS36931.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
  
     0.770
EGS35571.1
Hypothetical protein.
  
     0.767
EGS39558.1
Hypothetical protein.
  
     0.759
EGS37003.1
Hypothetical protein.
  
     0.692
EGS36445.1
Hypothetical protein.
  
     0.685
EGS37957.1
Hypothetical protein.
  
     0.680
EGS38038.1
Hypothetical protein.
  
     0.645
EGS38143.1
Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
  
 
   0.644
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.