STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36076.1Hypothetical protein. (644 aa)    
Predicted Functional Partners:
EGS35972.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
 
     0.915
EGS36000.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
   
 0.736
EGS36613.1
LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF00746; match to protein family HMM PF04650; match to protein family HMM PF06458; match to protein family HMM TIGR01167; match to protein family HMM TIGR01168.
  
 0.651
EGS36024.1
Beta-galactosidase trimerization domain protein; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.
 
  
 0.566
EGS38049.1
Putative phage tail component, N-terminal domain protein; Identified by match to protein family HMM PF06997.
   
   0.457
EGS37891.1
LysM domain protein; Identified by match to protein family HMM PF01476.
   
 
 0.452
argS
arginine--tRNA ligase; Identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456.
       0.451
acpP
Acyl carrier protein; Identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517.
  
 
 0.447
dltC
D-alanine--poly(phosphoribitol) ligase, subunit 2; Identified by match to protein family HMM PF00550; match to protein family HMM TIGR01688.
  
 
 0.447
EGS36298.1
Putative acyl carrier protein; Identified by match to protein family HMM PF00550.
  
 
 0.447
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.