araA protein (Lactobacillus oris) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

araA

L-arabinose isomerase; Identified by match to protein family HMM PF02610. (474 aa)

Predicted Functional Partners:

EGS35996.1

0.974

araD_1

0.937

araD_2

0.924

EGS35852.1

0.861

EGS36329.1

0.662

EGS36002.1

0.583

fsa

0.574

abfA

0.506

EGS36037.1

0.500

EGS35822.1

0.484

Your Current Organism:

Lactobacillus oris

NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EGS35822.1	araA	HMPREF9102_0951	HMPREF9102_0952	Hypothetical protein; Identified by glimmer; putative.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.484
EGS35852.1	EGS35996.1	HMPREF9102_0954	HMPREF9102_0956	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	0.940
EGS35852.1	EGS36002.1	HMPREF9102_0954	HMPREF9102_0953	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879.	0.515
EGS35852.1	araA	HMPREF9102_0954	HMPREF9102_0952	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.861
EGS35852.1	araD_1	HMPREF9102_0954	HMPREF9102_0955	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.	0.669
EGS35996.1	EGS35852.1	HMPREF9102_0956	HMPREF9102_0954	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	0.940
EGS35996.1	EGS36002.1	HMPREF9102_0956	HMPREF9102_0953	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879.	0.412
EGS35996.1	EGS36037.1	HMPREF9102_0956	HMPREF9102_0959	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.	0.490
EGS35996.1	araA	HMPREF9102_0956	HMPREF9102_0952	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.974
EGS35996.1	araD_1	HMPREF9102_0956	HMPREF9102_0955	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.	0.911
EGS35996.1	araD_2	HMPREF9102_0956	HMPREF9102_0963	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.	0.683
EGS35996.1	fsa	HMPREF9102_0956	HMPREF9102_1660	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	Fructose-6-phosphate aldolase; Identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875.	0.490
EGS36002.1	EGS35852.1	HMPREF9102_0953	HMPREF9102_0954	MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879.	Putative arabinose metabolism transcriptional repressor; Identified by match to protein family HMM PF00392; match to protein family HMM PF00532.	0.515
EGS36002.1	EGS35996.1	HMPREF9102_0953	HMPREF9102_0956	MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879.	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	0.412
EGS36002.1	araA	HMPREF9102_0953	HMPREF9102_0952	MFS transporter, SP family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.583
EGS36037.1	EGS35996.1	HMPREF9102_0959	HMPREF9102_0956	Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.	Carbohydrate kinase, FGGY family protein; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.	0.490
EGS36037.1	abfA	HMPREF9102_0959	HMPREF9102_0972	Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.	alpha-N-arabinofuranosidase 1; Identified by match to protein family HMM PF06964.	0.730
EGS36037.1	araA	HMPREF9102_0959	HMPREF9102_0952	Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.500
EGS36037.1	araD_1	HMPREF9102_0959	HMPREF9102_0955	Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.	L-ribulose-5-phosphate 4-epimerase; Identified by match to protein family HMM PF00596.	0.401
EGS36329.1	araA	HMPREF9102_2108	HMPREF9102_0952	Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.	L-arabinose isomerase; Identified by match to protein family HMM PF02610.	0.662