STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36088.1Putative serine/threonine exchanger SteT; Identified by match to protein family HMM PF00324. (445 aa)    
Predicted Functional Partners:
thiD-2
Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097.
  
    0.724
EGS36077.1
Threonine ammonia-lyase; Identified by match to protein family HMM PF00291.
 
 
 0.631
malL
Oligo-1,6-glucosidase; Identified by match to protein family HMM PF00128.
  
 0.586
gtfA-2
Sucrose phosphorylase; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR03852.
  
 0.586
EGS35959.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
    
0.472
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.