Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS35571.1 | EGS35953.1 | HMPREF9102_0254 | HMPREF9102_1029 | Hypothetical protein. | Hypothetical protein. | 0.490 |
| EGS35571.1 | EGS36612.1 | HMPREF9102_0254 | HMPREF9102_0854 | Hypothetical protein. | Hypothetical protein. | 0.759 |
| EGS35571.1 | EGS36621.1 | HMPREF9102_0254 | HMPREF9102_0853 | Hypothetical protein. | Hypothetical protein. | 0.771 |
| EGS35571.1 | mreD | HMPREF9102_0254 | HMPREF9102_0055 | Hypothetical protein. | Rod shape-determining protein MreD; Identified by match to protein family HMM TIGR03426. | 0.623 |
| EGS35868.1 | EGS35953.1 | HMPREF9102_1028 | HMPREF9102_1029 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Hypothetical protein. | 0.714 |
| EGS35868.1 | EGS35981.1 | HMPREF9102_1028 | HMPREF9102_1027 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.899 |
| EGS35868.1 | EGS36066.1 | HMPREF9102_1028 | HMPREF9102_1030 | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807. | 0.547 |
| EGS35953.1 | EGS35571.1 | HMPREF9102_1029 | HMPREF9102_0254 | Hypothetical protein. | Hypothetical protein. | 0.490 |
| EGS35953.1 | EGS35868.1 | HMPREF9102_1029 | HMPREF9102_1028 | Hypothetical protein. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.714 |
| EGS35953.1 | EGS35981.1 | HMPREF9102_1029 | HMPREF9102_1027 | Hypothetical protein. | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.538 |
| EGS35953.1 | EGS36066.1 | HMPREF9102_1029 | HMPREF9102_1030 | Hypothetical protein. | Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807. | 0.590 |
| EGS35953.1 | EGS36456.1 | HMPREF9102_1029 | HMPREF9102_0171 | Hypothetical protein. | Hypothetical protein. | 0.660 |
| EGS35953.1 | EGS36584.1 | HMPREF9102_1029 | HMPREF9102_0859 | Hypothetical protein. | Hypothetical protein. | 0.555 |
| EGS35953.1 | EGS36612.1 | HMPREF9102_1029 | HMPREF9102_0854 | Hypothetical protein. | Hypothetical protein. | 0.689 |
| EGS35953.1 | EGS36621.1 | HMPREF9102_1029 | HMPREF9102_0853 | Hypothetical protein. | Hypothetical protein. | 0.594 |
| EGS35953.1 | EGS38994.1 | HMPREF9102_1029 | HMPREF9102_0023 | Hypothetical protein. | Identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040. | 0.559 |
| EGS35953.1 | mreD | HMPREF9102_1029 | HMPREF9102_0055 | Hypothetical protein. | Rod shape-determining protein MreD; Identified by match to protein family HMM TIGR03426. | 0.512 |
| EGS35981.1 | EGS35868.1 | HMPREF9102_1027 | HMPREF9102_1028 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Conserved domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | 0.899 |
| EGS35981.1 | EGS35953.1 | HMPREF9102_1027 | HMPREF9102_1029 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Hypothetical protein. | 0.538 |
| EGS35981.1 | EGS36066.1 | HMPREF9102_1027 | HMPREF9102_1030 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts. | Phosphogluconate dehydrogenase (decarboxylating), NAD binding domain protein; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807. | 0.422 |
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