STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS35843.1Hypothetical protein. (388 aa)    
Predicted Functional Partners:
cbg
Beta-glucosidase; Identified by match to protein family HMM PF00933; match to protein family HMM PF01915.
 
 
 0.977
EGS39508.1
Glycosyl hydrolase, family 31; Identified by match to protein family HMM PF01055.
 
  
  0.914
EGS35974.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
 
   
 0.797
EGS36024.1
Beta-galactosidase trimerization domain protein; Identified by match to protein family HMM PF02449; match to protein family HMM PF08532; match to protein family HMM PF08533.
 
   
 0.723
EGS35772.1
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616.
 
   
 0.593
EGS35752.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.
 
   
 0.555
EGS35951.1
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
 
   
 0.453
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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