STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS35836.1Identified by match to protein family HMM PF07949. (281 aa)    
Predicted Functional Partners:
EGS36087.1
Identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159.
 
  
 0.981
glmM
Phosphoglucosamine mutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455.
  
  
 0.936
EGS35911.1
CamS sex pheromone family protein; Identified by match to protein family HMM PF07537.
 
     0.755
EGS37823.1
Replication initiation and membrane attachment protein, DnaB/DnaD family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF07261.
  
     0.723
EGS36017.1
Identified by match to protein family HMM PF07099.
       0.717
murB
UDP-N-acetylmuramate dehydrogenase; Identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179.
       0.679
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135.
     
 0.664
EGS38037.1
Identified by match to protein family HMM PF03672.
  
     0.637
ezrA
Septation ring formation regulator EzrA; Identified by match to protein family HMM PF06160.
  
     0.612
EGS37829.1
Identified by match to protein family HMM PF02620.
  
     0.581
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.