STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS37451.1Identified by match to protein family HMM PF06354. (426 aa)    
Predicted Functional Partners:
EGS37384.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.499
EGS37439.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
       0.499
EGS37393.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
       0.499
EGS37414.1
SNARE-like domain protein; Identified by match to protein family HMM PF09335.
       0.494
EGS37370.1
Inosine-uridine preferring nucleoside hydrolase; Identified by match to protein family HMM PF01156.
       0.490
EGS37401.1
Hypothetical protein.
       0.490
EGS37348.1
Phosphotransferase enzyme family; Identified by match to protein family HMM PF01636.
       0.490
EGS37392.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
       0.490
EGS37325.1
ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
       0.490
EGS37398.1
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Identified by match to protein family HMM PF00375.
       0.488
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.