STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mobBMolybdopterin-guanine dinucleotide biosynthesis protein B; Identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176. (164 aa)    
Predicted Functional Partners:
EGS37377.1
Identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177.
 
 
 0.985
EGS37353.1
Hypothetical protein.
 
 
 0.968
EGS37329.1
Putative molybdenum cofactor biosynthesis protein B; Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00177.
 
 
 
 0.965
EGS37339.1
Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
 
  
 0.946
EGS37315.1
Hypothetical protein.
 
     0.885
EGS37471.1
Hypothetical protein.
       0.828
narJ
Nitrate reductase molybdenum cofactor assembly chaperone; Identified by match to protein family HMM PF02613; match to protein family HMM TIGR00684.
 
   
 0.682
metG
methionine--tRNA ligase; Identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399.
       0.652
moaE
Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391.
 
  
 0.589
EGS37289.1
Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580.
     
 0.585
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.