STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS37338.1Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF00950; match to protein family HMM PF01032. (331 aa)    
Predicted Functional Partners:
EGS37314.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 0.999
EGS37481.1
ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01497.
 
 0.973
EGS35571.1
Hypothetical protein.
  
 0.859
EGS37295.1
Flavodoxin; Identified by match to protein family HMM PF00258.
  
  
 0.803
EGS37029.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.682
EGS35999.1
Iron dependent repressor, N-terminal DNA binding domain protein; Identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023.
 
   
 0.581
moaE
Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391.
       0.556
EGS36940.1
Putative molybdenum cofactor biosynthesis protein C; Identified by match to protein family HMM PF00005; match to protein family HMM PF02687.
  
 
 0.537
EGS37290.1
Identified by match to protein family HMM PF02597.
       0.512
EGS37402.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
 
  
 0.488
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.