STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS37481.1ABC transporter, substrate-binding protein; Identified by match to protein family HMM PF01497. (339 aa)    
Predicted Functional Partners:
EGS37338.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF00950; match to protein family HMM PF01032.
 
 0.973
EGS37314.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.973
EGS37461.1
Hypothetical protein.
 
     0.800
EGS37353.1
Hypothetical protein.
 
    0.788
EGS37315.1
Hypothetical protein.
  
     0.766
EGS37377.1
Identified by match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177.
 
    0.708
EGS37450.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730.
 
     0.685
EGS37339.1
Identified by match to protein family HMM PF00899; match to protein family HMM PF05237.
 
     0.669
EGS37402.1
Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690.
 
  
 0.621
EGS36940.1
Putative molybdenum cofactor biosynthesis protein C; Identified by match to protein family HMM PF00005; match to protein family HMM PF02687.
  
 
 0.591
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.