Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS37012.1 | EGS38488.1 | HMPREF9102_1787 | HMPREF9102_1570 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.402 |
| EGS37012.1 | EGS38499.1 | HMPREF9102_1787 | HMPREF9102_1572 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Hypothetical protein. | 0.734 |
| EGS37012.1 | EGS38555.1 | HMPREF9102_1787 | HMPREF9102_1571 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.536 |
| EGS37012.1 | EGS38571.1 | HMPREF9102_1787 | HMPREF9102_1578 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Respiratory-chain NADH dehydrogenase 51 Kd subunit; Identified by match to protein family HMM PF01512. | 0.514 |
| EGS37012.1 | EGS38573.1 | HMPREF9102_1787 | HMPREF9102_1569 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.682 |
| EGS37012.1 | EGS38586.1 | HMPREF9102_1787 | HMPREF9102_1568 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein domain protein. | 0.679 |
| EGS37012.1 | prdA | HMPREF9102_1787 | HMPREF9102_1573 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein; Identified by match to protein family HMM PF09338. | 0.684 |
| EGS38488.1 | EGS37012.1 | HMPREF9102_1570 | HMPREF9102_1787 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | 0.402 |
| EGS38488.1 | EGS38499.1 | HMPREF9102_1570 | HMPREF9102_1572 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.890 |
| EGS38488.1 | EGS38519.1 | HMPREF9102_1570 | HMPREF9102_1557 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative membrane protein. | 0.814 |
| EGS38488.1 | EGS38543.1 | HMPREF9102_1570 | HMPREF9102_1566 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative membrane protein. | 0.880 |
| EGS38488.1 | EGS38555.1 | HMPREF9102_1570 | HMPREF9102_1571 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.890 |
| EGS38488.1 | EGS38571.1 | HMPREF9102_1570 | HMPREF9102_1578 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Respiratory-chain NADH dehydrogenase 51 Kd subunit; Identified by match to protein family HMM PF01512. | 0.784 |
| EGS38488.1 | EGS38573.1 | HMPREF9102_1570 | HMPREF9102_1569 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | D-proline reductase, PrdA proprotein family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.905 |
| EGS38488.1 | EGS38586.1 | HMPREF9102_1570 | HMPREF9102_1568 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | D-proline reductase, PrdA proprotein domain protein. | 0.902 |
| EGS38488.1 | EGS38594.1 | HMPREF9102_1570 | HMPREF9102_1563 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Hypothetical protein. | 0.639 |
| EGS38488.1 | prdA | HMPREF9102_1570 | HMPREF9102_1573 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | D-proline reductase, PrdA proprotein; Identified by match to protein family HMM PF09338. | 0.891 |
| EGS38499.1 | EGS37012.1 | HMPREF9102_1572 | HMPREF9102_1787 | Hypothetical protein. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | 0.734 |
| EGS38499.1 | EGS38488.1 | HMPREF9102_1572 | HMPREF9102_1570 | Hypothetical protein. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.890 |
| EGS38499.1 | EGS38519.1 | HMPREF9102_1572 | HMPREF9102_1557 | Hypothetical protein. | Putative membrane protein. | 0.814 |
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