STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS38604.1Hypothetical protein. (174 aa)    
Predicted Functional Partners:
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534.
  
 0.982
tkt
Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232.
  
 0.974
fsa
Fructose-6-phosphate aldolase; Identified by match to protein family HMM PF00923; match to protein family HMM TIGR00875.
  
 0.974
tpiA-2
Triose-phosphate isomerase; Identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419.
  
  
 
0.913
eno
Phosphopyruvate hydratase; Identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060.
  
 
 0.834
zwf
Glucose-6-phosphate dehydrogenase; Identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871.
  
 
 0.826
xfp
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Identified by match to protein family HMM PF03894; match to protein family HMM PF09363; match to protein family HMM PF09364.
    
 0.824
pgk
Phosphoglycerate kinase; Identified by match to protein family HMM PF00162.
  
 
 0.808
EGS37297.1
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037.
  
  
 0.671
polA
DNA-directed DNA polymerase; Identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593.
   
 
 0.664
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.