STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS37016.1Identified by match to protein family HMM PF06541. (257 aa)    
Predicted Functional Partners:
EGS37309.1
Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
 
     0.926
EGS37032.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.768
EGS36583.1
HD domain protein; Identified by match to protein family HMM PF01966.
     0.745
EGS36800.1
Putative cardiolipin synthetase; Identified by match to protein family HMM PF00614.
      0.631
EGS39506.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
     0.580
EGS36937.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF01832.
       0.511
EGS37847.1
Identified by match to protein family HMM PF06912.
  
     0.464
EGS36955.1
Putative cardiolipin synthetase; Identified by match to protein family HMM PF00614.
      0.462
EGS37993.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
     0.454
EGS37417.1
AraC-like ligand binding domain protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF02311.
  
     0.425
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.