STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGS36933.1Lipoyltransferase and lipoate-protein ligase; Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545. (337 aa)    
Predicted Functional Partners:
EGS38525.1
Biotin/lipoate A/B protein ligase family protein.
 
  
 0.952
pdhC
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817.
 
 0.924
EGS36091.1
Acyl-ACP thioesterase; Identified by match to protein family HMM PF01643.
     
  0.900
bkdA
2-oxoisovalerate dehydrogenase subunit beta; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780.
 
 0.839
EGS35860.1
Glycine cleavage H-protein; Identified by match to protein family HMM PF01597.
 
 
 0.825
lpdA
Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350.
 
 
 0.809
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; Identified by match to protein family HMM PF00676; match to protein family HMM TIGR03181.
 
 
 0.748
nox
NADH oxidase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
     0.612
EGS36998.1
Hypothetical protein.
  
    0.558
EGS36912.1
Putative translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03764; match to protein family HMM TIGR00231.
  
 
 0.535
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.