STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zwfGlucose-6-phosphate dehydrogenase; Identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871. (493 aa)    
Predicted Functional Partners:
gnd-2
Phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873.
 
 0.986
gnd
Phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00872.
  
 0.982
EGS37996.1
Hypothetical protein.
 
  
 0.937
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534.
  
 0.931
eno
Phosphopyruvate hydratase; Identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060.
    
 0.921
pyk
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064.
  
 
 0.897
tpiA-2
Triose-phosphate isomerase; Identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419.
  
 
 0.883
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258.
  
 0.854
GpmA
Phosphoglycerate mutase 1 family; Identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258.
  
 0.854
pdhA
Pyruvate dehydrogenase E1 component, alpha subunit; Identified by match to protein family HMM PF00676; match to protein family HMM TIGR03181.
     
 0.840
Your Current Organism:
Lactobacillus oris
NCBI taxonomy Id: 944562
Other names: L. oris F0423, Lactobacillus oris F0423, Lactobacillus oris str. F0423, Lactobacillus oris strain F0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.