Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EGS37012.1 | EGS37303.1 | HMPREF9102_1787 | HMPREF9102_1399 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | 0.448 |
| EGS37012.1 | EGS38499.1 | HMPREF9102_1787 | HMPREF9102_1572 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Hypothetical protein. | 0.734 |
| EGS37012.1 | EGS38555.1 | HMPREF9102_1787 | HMPREF9102_1571 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.536 |
| EGS37012.1 | EGS38571.1 | HMPREF9102_1787 | HMPREF9102_1578 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Respiratory-chain NADH dehydrogenase 51 Kd subunit; Identified by match to protein family HMM PF01512. | 0.514 |
| EGS37012.1 | EGS38573.1 | HMPREF9102_1787 | HMPREF9102_1569 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.682 |
| EGS37012.1 | EGS38586.1 | HMPREF9102_1787 | HMPREF9102_1568 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein domain protein. | 0.679 |
| EGS37012.1 | EGS39590.1 | HMPREF9102_1787 | HMPREF9102_1322 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.579 |
| EGS37012.1 | gltT | HMPREF9102_1787 | HMPREF9102_1788 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Proton/sodium-glutamate symport protein GltT; Identified by match to protein family HMM PF00375. | 0.524 |
| EGS37012.1 | pepI | HMPREF9102_1787 | HMPREF9102_1575 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | Prolyl aminopeptidase; Identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250. | 0.461 |
| EGS37012.1 | prdA | HMPREF9102_1787 | HMPREF9102_1573 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | D-proline reductase, PrdA proprotein; Identified by match to protein family HMM PF09338. | 0.684 |
| EGS37303.1 | EGS37012.1 | HMPREF9102_1399 | HMPREF9102_1787 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | 0.448 |
| EGS37303.1 | EGS39590.1 | HMPREF9102_1399 | HMPREF9102_1322 | SNARE-like domain protein; Identified by match to protein family HMM PF09335. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.781 |
| EGS38499.1 | EGS37012.1 | HMPREF9102_1572 | HMPREF9102_1787 | Hypothetical protein. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | 0.734 |
| EGS38499.1 | EGS38555.1 | HMPREF9102_1572 | HMPREF9102_1571 | Hypothetical protein. | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | 0.951 |
| EGS38499.1 | EGS38571.1 | HMPREF9102_1572 | HMPREF9102_1578 | Hypothetical protein. | Respiratory-chain NADH dehydrogenase 51 Kd subunit; Identified by match to protein family HMM PF01512. | 0.792 |
| EGS38499.1 | EGS38573.1 | HMPREF9102_1572 | HMPREF9102_1569 | Hypothetical protein. | D-proline reductase, PrdA proprotein family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.866 |
| EGS38499.1 | EGS38586.1 | HMPREF9102_1572 | HMPREF9102_1568 | Hypothetical protein. | D-proline reductase, PrdA proprotein domain protein. | 0.864 |
| EGS38499.1 | EGS39590.1 | HMPREF9102_1572 | HMPREF9102_1322 | Hypothetical protein. | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift. | 0.660 |
| EGS38499.1 | prdA | HMPREF9102_1572 | HMPREF9102_1573 | Hypothetical protein. | D-proline reductase, PrdA proprotein; Identified by match to protein family HMM PF09338. | 0.951 |
| EGS38555.1 | EGS37012.1 | HMPREF9102_1571 | HMPREF9102_1787 | Putative D-proline reductase, PrdB subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF00854; match to protein family HMM PF07690. | 0.536 |
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